STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspMGeneral secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (163 aa)    
Predicted Functional Partners:
gspL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.998
gspC
General secretion pathway protein C; Identified by similarity to GB:AAA58784.1; match to protein family HMM TIGR01713.
 
   
 0.938
gspJ
General secretion pathway protein J; Identified by similarity to SP:P31739; match to protein family HMM PF07963; match to protein family HMM TIGR01711; match to protein family HMM TIGR02532.
 
  
 0.931
gspN
Bacterial type II secretion system protein N; Identified by match to protein family HMM PF01203.
 
   
 0.916
gspK
General secretion pathway protein K; Identified by similarity to SP:P31760; match to protein family HMM PF03934.
 
  
 0.894
gspH
General secretion pathway protein H; Identified by similarity to SP:P31735; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532.
 
   
 0.876
gspI
General secretion pathway protein I; Identified by similarity to SP:P31737; match to protein family HMM PF02501; match to protein family HMM PF07963; match to protein family HMM TIGR01707; match to protein family HMM TIGR02532.
 
   
 0.866
gspF
General secretion pathway protein F; Identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120.
 
  
 0.855
gspG
General secretion pathway protein G; Identified by similarity to SP:P31733; match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532.
 
  
 0.835
gspD
General secretion pathway protein D; Identified by similarity to SP:P45758; match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIGR02517.
 
  
 0.829
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.