STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_0807N-acetyl-galactosamine; Identified by match to protein family HMM PF03610. (165 aa)    
Predicted Functional Partners:
AHA_0808
N-acetylgalactosamine permease IID component; Identified by match to protein family HMM PF03613.
 
 0.998
AHA_0809
N-acetylgalactosamine permease IIC component 1; Identified by match to protein family HMM PF03609.
 
 0.998
AHA_0810
N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2; Identified by match to protein family HMM PF03830; match to protein family HMM TIGR00854.
 
 
 0.998
nagA-1
N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221.
 
 
 0.985
AHA_0811
Putative tagatose-6-phosphate ketose/aldose isomerase; Identified by match to protein family HMM PF01380; match to protein family HMM TIGR02815.
 
  
 0.957
ptsH
Phosphocarrier protein PtsH; Identified by similarity to SP:P16481; match to protein family HMM PF00381; match to protein family HMM TIGR01003.
   
 0.946
AHA_2339
Fructose permease IID component; Identified by match to protein family HMM PF03613.
 
 
 0.945
AHA_2340
PTS system, fructose(mannose)-specific IIC; Identified by match to protein family HMM PF03609.
 
 
 0.943
AHA_2341
Pts system mannose-specific eiiab component (eiiab-man); Identified by match to protein family HMM PF03830.
 
  
 0.928
AHA_0812
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; Identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810.
 
    0.894
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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