STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_1007Conserved hypothetical protein. (113 aa)    
Predicted Functional Partners:
AHA_1008
5'-nucleotidase/2',3'-cyclic phosphodiesterase; Identified by match to protein family HMM PF00149; match to protein family HMM PF02872; Belongs to the 5'-nucleotidase family.
       0.549
AHA_4010
Phosphoribosylaminoimidazole carboxylase ATPase subunit; Identified by match to protein family HMM PF07883.
  
     0.539
AHA_2863
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02647.
  
     0.518
AHA_1006
Hypothetical protein; Identified by Glimmer2; putative.
       0.499
AHA_1162
Conserved hypothetical protein.
  
     0.478
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR02735; Belongs to the SAICAR synthetase family.
  
     0.475
AHA_2597
Conserved hypothetical protein; Identified by match to protein family HMM PF07233.
  
     0.474
AHA_3141
Hemerythrin HHE cation binding domain subfamily, putative; Identified by match to protein family HMM PF01814.
  
     0.452
AHA_1010
Import inner membrane translocase, subunit Tim44; Identified by match to protein family HMM PF04280.
 
     0.432
AHA_2890
Conserved hypothetical protein.
  
     0.425
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.