Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHA_1114 | AHA_1115 | AHA_1114 | AHA_1115 | Outer membrane protein; Identified by match to protein family HMM PF01323. | Hypothetical protein; Identified by Glimmer2; putative. | 0.566 |
| AHA_1114 | AHA_1797 | AHA_1114 | AHA_1797 | Outer membrane protein; Identified by match to protein family HMM PF01323. | Response regulator; Identified by match to protein family HMM PF00072. | 0.442 |
| AHA_1114 | AHA_3742 | AHA_1114 | AHA_3742 | Outer membrane protein; Identified by match to protein family HMM PF01323. | Membrane protein, suppressor for copper-sensitivity B; Identified by match to protein family HMM PF02683. | 0.791 |
| AHA_1114 | dsbB | AHA_1114 | AHA_2445 | Outer membrane protein; Identified by match to protein family HMM PF01323. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.576 |
| AHA_1114 | dsbD | AHA_1114 | AHA_0785 | Outer membrane protein; Identified by match to protein family HMM PF01323. | Thiol:disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.764 |
| AHA_1114 | polA | AHA_1114 | AHA_0196 | Outer membrane protein; Identified by match to protein family HMM PF01323. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.400 |
| AHA_1115 | AHA_1114 | AHA_1115 | AHA_1114 | Hypothetical protein; Identified by Glimmer2; putative. | Outer membrane protein; Identified by match to protein family HMM PF01323. | 0.566 |
| AHA_1797 | AHA_1114 | AHA_1797 | AHA_1114 | Response regulator; Identified by match to protein family HMM PF00072. | Outer membrane protein; Identified by match to protein family HMM PF01323. | 0.442 |
| AHA_3742 | AHA_1114 | AHA_3742 | AHA_1114 | Membrane protein, suppressor for copper-sensitivity B; Identified by match to protein family HMM PF02683. | Outer membrane protein; Identified by match to protein family HMM PF01323. | 0.791 |
| dsbB | AHA_1114 | AHA_2445 | AHA_1114 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Outer membrane protein; Identified by match to protein family HMM PF01323. | 0.576 |
| dsbD | AHA_1114 | AHA_0785 | AHA_1114 | Thiol:disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Outer membrane protein; Identified by match to protein family HMM PF01323. | 0.764 |
| polA | AHA_1114 | AHA_0196 | AHA_1114 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Outer membrane protein; Identified by match to protein family HMM PF01323. | 0.400 |