STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_1321Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (451 aa)    
Predicted Functional Partners:
AHA_1320
Putative transporter AmrB; Identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915.
 0.994
aheB
AcrB protein; Identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915.
 0.978
AHA_2960
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915.
 0.977
AHA_2909
Outer membrane protein OprM; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.
 
 0.971
AHA_0021
Acriflavin resistance plasma membrane protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.939
AHA_3766
HAS ABC exporter outer membrane component; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844.
 
 0.918
macB1
Macrolide-specific ABC-type efflux carrier; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.908
macB2
Macrolide-specific ABC-type efflux carrier; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.908
AHA_2991
Outer membrane efflux protein; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.
 
 
 0.784
AHA_1288
Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.753
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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