STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_1663Hemin receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01785; match to protein family HMM TIGR01786. (720 aa)    
Predicted Functional Partners:
AHA_1661
Proprotein convertase P-domain; Identified by match to protein family HMM PF01483.
 
   
 0.867
AHA_4275
Ferrichrome receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783.
  
  
 0.824
AHA_1662
Protease II; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897.
       0.784
AHA_1660
Conserved hypothetical protein.
 
     0.764
tonB-2
Outer membrane receptor-mediated transport energizer protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.731
AHA_3438
Periplasmic protein TonB2; Identified by match to protein family HMM TIGR01352.
 
 
 0.726
tonB-1
Outer membrane receptor-mediated transport energizer protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.715
AHA_0517
Collagenase family; Identified by match to protein family HMM PF01752.
  
 
 
 0.713
AHA_2477
Isochorismatase; Identified by similarity to SP:P15048; match to protein family HMM PF00550; match to protein family HMM PF00857.
  
  
 0.659
AHA_1659
Conserved hypothetical protein; Identified by match to protein family HMM PF07603.
 
     0.647
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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