STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_1834Conserved hypothetical protein; Identified by similarity to GB:CAG76342.1; match to protein family HMM PF07025. (143 aa)    
Predicted Functional Partners:
AHA_1836
Conserved hypothetical protein; Identified by similarity to GB:CAG76340.1; match to protein family HMM PF06996.
 
  
 0.981
AHA_1832
Conserved hypothetical protein; Identified by similarity to GB:CAG76344.1; match to protein family HMM PF05591.
 
  
 0.979
AHA_1835
Conserved hypothetical protein; Identified by similarity to GB:CAH22873.1; match to protein family HMM PF05947.
 
  
 0.978
AHA_1833
Conserved hypothetical protein; Identified by similarity to GB:CAG76343.1; match to protein family HMM PF05943.
 
  
 0.977
AHA_1838
Putative lipoprotein.
 
  
 0.955
AHA_1837
Conserved hypothetical protein; Identified by similarity to GB:CAG76339.1.
 
  
 0.951
AHA_1839
Conserved hypothetical protein; Identified by match to protein family HMM PF05936.
 
  
 0.950
AHA_1840
Conserved hypothetical protein; Identified by similarity to GB:AAF96029.1.
 
  
 0.942
AHA_1844
ImpA-related domain protein; Identified by match to protein family HMM PF06812.
 
  
 0.925
AHA_1846
ImpA domain protein; Identified by match to protein family HMM PF06812.
 
  
 0.911
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.