STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_2167Xanthine dehydrogenase accessory factor, putative subfamily, putative; Identified by match to protein family HMM PF02625. (530 aa)    
Predicted Functional Partners:
AHA_2168
Conserved hypothetical protein.
 
  
 0.980
AHA_2169
Hypotehtical YgfJ.
 
  
 0.966
AHA_2173
Possible hypoxanthine oxidase XdhD; Identified by match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738.
 
  
 0.930
AHA_2178
Xanthine dehydrogenase, FAD binding subunit; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
 
  
 0.921
AHA_2172
FAD binding domain in molybdopterin dehydrogenase protein; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
 
  
 0.918
AHA_2177
Xanthine dehydrogenase, molybdenum binding subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
 
  
 0.891
accC
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.883
AHA_2179
Carbon monoxide dehydrogenase small chain; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
 
  
 0.879
AHA_2075
methylcrotonoyl-CoA carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786.
  
 
 0.848
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 
 0.837
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.