STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_2168Conserved hypothetical protein. (282 aa)    
Predicted Functional Partners:
AHA_2167
Xanthine dehydrogenase accessory factor, putative subfamily, putative; Identified by match to protein family HMM PF02625.
 
  
 0.980
AHA_2169
Hypotehtical YgfJ.
 
  
 0.872
AHA_2173
Possible hypoxanthine oxidase XdhD; Identified by match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738.
 
  
 0.862
AHA_2178
Xanthine dehydrogenase, FAD binding subunit; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
 
  
 0.804
AHA_2177
Xanthine dehydrogenase, molybdenum binding subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
 
   
 0.783
AHA_2170
Pyridine nucleotide-disulphide oxidoreductase domain protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
    0.774
AHA_2172
FAD binding domain in molybdopterin dehydrogenase protein; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
 
  
 0.754
AHA_2171
Protein SsnA; Identified by match to protein family HMM PF01979.
 
    0.736
AHA_2162
Diaminopropionate ammonia-lyase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01747.
 
    0.726
AHA_2163
Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
 
   
 0.702
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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