STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_2364Conserved hypothetical protein. (409 aa)    
Predicted Functional Partners:
AHA_1392
ATPase involved in DNA repair.
  
     0.671
AHA_2363
Carbohydrate binding domain protein; Identified by match to protein family HMM PF00182; match to protein family HMM PF02839.
 
     0.561
AHA_3463
Conserved hypothetical protein.
  
     0.531
AHA_2365
PhnA protein; Identified by match to protein family HMM PF03831.
       0.524
ccoQ
Cytochrome c oxidase, cbb3-type, CcoQ subunit; Identified by similarity to GB:AAM76066.1; match to protein family HMM PF05545.
  
     0.518
AHA_2117
Conserved domain protein.
  
     0.511
AHA_1159
Zn-ribbon-containing protein.
  
     0.490
AHA_0427
Conserved hypothetical protein.
  
     0.473
AHA_3660
Conserved hypothetical protein.
  
     0.449
AHA_3417
Conserved hypothetical protein.
  
     0.441
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.