STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_2425ABC type drug efflux transporter, fused ATP binding and permease domains; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (583 aa)    
Predicted Functional Partners:
AHA_2427
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
  
 
0.961
AHA_3376
Glycine betaine/L-proline ABC transporter, ATP binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.
 
     
0.852
AHA_2802
Glutamate transport ATP-binding protein GluA; Identified by match to protein family HMM PF00005.
 
     
0.815
pstB
Phosphate ABC transporter, ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.778
metN
D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.761
AHA_1354
RTX toxin transporter; Identified by similarity to GB:AAF94603.1; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.
 
 
 
0.588
rtxB
RTX toxin transporter; Identified by similarity to GB:AAD21059.1; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.
 
 
 
0.588
AHA_2705
Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     
0.588
AHA_2701
Toxin secretion ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
   
 
0.551
AHA_2424
Conserved hypothetical protein; Identified by similarity to GB:BAC59878.1.
       0.545
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.