STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_2585Conserved hypothetical protein; Identified by match to protein family HMM PF05728; Belongs to the UPF0227 family. (211 aa)    
Predicted Functional Partners:
AHA_1275
Protein YciN.
  
     0.764
AHA_1999
Conserved hypothetical protein; Identified by match to protein family HMM PF06526.
  
     0.721
AHA_1764
Ubiquitin ligase sinat5; Identified by match to protein family HMM PF07191.
  
     0.720
crl
Curlin genes transcriptional activatory protein; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.
  
     0.693
zapC
Conserved hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.685
AHA_3088
Conserved hypothetical protein; Identified by similarity to GB:CAH22153.1.
  
     0.670
AHA_1169
Conserved hypothetical protein; Belongs to the UPF0325 family.
  
     0.668
AHA_0726
VWA domain containing CoxE-like family protein; Identified by match to protein family HMM PF05762.
  
     0.665
lapA
Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.656
AHA_3423
Esterase YafA; Identified by match to protein family HMM PF06500; Belongs to the UPF0255 family.
  
   
 0.653
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.