node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHA_2664 | AHA_2665 | AHA_2664 | AHA_2665 | Conserved hypothetical protein. | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | 0.773 |
AHA_2665 | AHA_2664 | AHA_2665 | AHA_2664 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Conserved hypothetical protein. | 0.773 |
AHA_2665 | AHA_2790 | AHA_2665 | AHA_2790 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.732 |
AHA_2665 | rplC | AHA_2665 | AHA_0309 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.735 |
AHA_2665 | rplK | AHA_2665 | AHA_4032 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.679 |
AHA_2665 | rplQ | AHA_2665 | AHA_0334 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.733 |
AHA_2665 | rplU | AHA_2665 | AHA_0930 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.678 |
AHA_2665 | rplX | AHA_2665 | AHA_0320 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.715 |
AHA_2665 | rsfS | AHA_2665 | AHA_3252 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | Iojap protein family; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.690 |
AHA_2665 | trmE | AHA_2665 | AHA_4280 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.688 |
AHA_2665 | truD | AHA_2665 | AHA_0825 | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.676 |
AHA_2790 | AHA_2665 | AHA_2790 | AHA_2665 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Pseudouridine synthase Rlu family protein; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR01621. | 0.732 |
AHA_2790 | rplC | AHA_2790 | AHA_0309 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.905 |
AHA_2790 | rplK | AHA_2790 | AHA_4032 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.872 |
AHA_2790 | rplQ | AHA_2790 | AHA_0334 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.879 |
AHA_2790 | rplU | AHA_2790 | AHA_0930 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.886 |
AHA_2790 | rplX | AHA_2790 | AHA_0320 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.885 |
AHA_2790 | rsfS | AHA_2790 | AHA_3252 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Iojap protein family; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.929 |
AHA_2790 | trmE | AHA_2790 | AHA_4280 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.861 |
AHA_2790 | truD | AHA_2790 | AHA_0825 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.834 |