Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHA_2744 | AHA_2746 | AHA_2744 | AHA_2746 | Conserved domain protein; Identified by match to protein family HMM PF04023. | Integral membrane protein; Identified by match to protein family HMM PF01169. | 0.440 |
AHA_2744 | yciH | AHA_2744 | AHA_2745 | Conserved domain protein; Identified by match to protein family HMM PF04023. | Translation initation factor SUI1, putative; Identified by match to protein family HMM PF01253. | 0.572 |
AHA_2746 | AHA_2744 | AHA_2746 | AHA_2744 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Conserved domain protein; Identified by match to protein family HMM PF04023. | 0.440 |
AHA_2746 | AHA_2747 | AHA_2746 | AHA_2747 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Putative membrane protein. | 0.668 |
AHA_2746 | AHA_2748 | AHA_2746 | AHA_2748 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Hypothetical protein; Identified by Glimmer2; putative. | 0.668 |
AHA_2746 | AHA_2749 | AHA_2746 | AHA_2749 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Putative membrane protein. | 0.668 |
AHA_2746 | AHA_2750 | AHA_2746 | AHA_2750 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Conserved protein. | 0.493 |
AHA_2746 | mgtA | AHA_2746 | AHA_0238 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Magnesium-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524. | 0.469 |
AHA_2746 | yciH | AHA_2746 | AHA_2745 | Integral membrane protein; Identified by match to protein family HMM PF01169. | Translation initation factor SUI1, putative; Identified by match to protein family HMM PF01253. | 0.429 |
AHA_2747 | AHA_2746 | AHA_2747 | AHA_2746 | Putative membrane protein. | Integral membrane protein; Identified by match to protein family HMM PF01169. | 0.668 |
AHA_2747 | AHA_2748 | AHA_2747 | AHA_2748 | Putative membrane protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.952 |
AHA_2747 | AHA_2749 | AHA_2747 | AHA_2749 | Putative membrane protein. | Putative membrane protein. | 0.952 |
AHA_2747 | AHA_2750 | AHA_2747 | AHA_2750 | Putative membrane protein. | Conserved protein. | 0.565 |
AHA_2748 | AHA_2746 | AHA_2748 | AHA_2746 | Hypothetical protein; Identified by Glimmer2; putative. | Integral membrane protein; Identified by match to protein family HMM PF01169. | 0.668 |
AHA_2748 | AHA_2747 | AHA_2748 | AHA_2747 | Hypothetical protein; Identified by Glimmer2; putative. | Putative membrane protein. | 0.952 |
AHA_2748 | AHA_2749 | AHA_2748 | AHA_2749 | Hypothetical protein; Identified by Glimmer2; putative. | Putative membrane protein. | 0.937 |
AHA_2748 | AHA_2750 | AHA_2748 | AHA_2750 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved protein. | 0.565 |
AHA_2749 | AHA_2746 | AHA_2749 | AHA_2746 | Putative membrane protein. | Integral membrane protein; Identified by match to protein family HMM PF01169. | 0.668 |
AHA_2749 | AHA_2747 | AHA_2749 | AHA_2747 | Putative membrane protein. | Putative membrane protein. | 0.952 |
AHA_2749 | AHA_2748 | AHA_2749 | AHA_2748 | Putative membrane protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.937 |
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