STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_3206Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009. (239 aa)    
Predicted Functional Partners:
AHA_1653
Glycerophosphoryl diester phosphodiesterase; Identified by match to protein family HMM PF03009.
     
 0.957
AHA_0036
Lysophospholipase L2; Identified by match to protein family HMM PF00561.
    
 0.947
AHA_2460
Anaerobic glycerol-3-phosphate dehydrogenase subunit A; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
 
 0.812
AHA_1652
Aerobic glycerol-3-phosphate dehydrogenase; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.768
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.742
AHA_3205
Small Conductance Mechanosensitive Ion Channel (MscS) Family Protein; Identified by match to protein family HMM PF00924.
       0.717
AHA_2461
Anaerobic glycerol-3-phosphate dehydrogenase subunit B; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
  
 
  0.681
phoR
Phosphate regulon sensor protein PhoR; Identified by similarity to SP:P08400; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR02966.
  
   
 0.559
AHA_2812
Transmembrane component of the phosphate specific transport complex; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974.
  
  
 0.540
ntrC
Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
      
 0.534
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.