STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHA_3948Conserved hypothetical protein. (354 aa)    
Predicted Functional Partners:
AHA_2374
Histone acetyltransferase HPA2; Identified by match to protein family HMM PF00583.
  
     0.687
AHA_1359
Structural toxin protein RtxA; Identified by similarity to GB:AAD21057.1; match to protein family HMM PF02018.
  
     0.671
AHA_0851
Elastase; Extracellular zinc metalloprotease.
  
     0.628
AHA_0635
Identified by match to protein family HMM PF03372.
 
     0.582
AHA_3051
Bacterial leucyl aminopeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389.
  
     0.574
rtxC
Cytolysin-activating lysine-acyltransferase RtxC; Identified by similarity to SP:Q9X4W3; match to protein family HMM PF02794.
  
     0.571
AHA_3947
Benzoate transporter; Identified by match to protein family HMM PF00860; match to protein family HMM PF03594; match to protein family HMM TIGR00843.
       0.475
AHA_2474
Nonribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
  
     0.446
AHA_1304
Alpha-amylase; Identified by similarity to SP:P22630; match to protein family HMM PF00128.
  
     0.445
AHA_0512
Lipase; Identified by match to protein family HMM PF00561.
  
     0.440
Your Current Organism:
Aeromonas hydrophila
NCBI taxonomy Id: 380703
Other names: A. hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila ATCC 7966, Aeromonas hydrophila subsp. hydrophila str. ATCC 7966, Aeromonas hydrophila subsp. hydrophila strain ATCC 7966
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