G3XLX0_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3XLX0_ASPNA

RNase III domain-containing protein. (372 aa)

Predicted Functional Partners:

G3Y381_ASPNA

0.900

G3Y204_ASPNA

0.881

G3XXI0_ASPNA

0.812

G3Y0I7_ASPNA

0.793

G3Y3F7_ASPNA

0.788

G3Y6M4_ASPNA

0.788

G3Y8G4_ASPNA

0.788

G3YH46_ASPNA

0.785

G3YF92_ASPNA

0.780

G3YFI9_ASPNA

0.777

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLX0_ASPNA	G3XXI0_ASPNA	G3XLX0	G3XXI0	RNase III domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.812
G3XLX0_ASPNA	G3Y0I7_ASPNA	G3XLX0	G3Y0I7	RNase III domain-containing protein.	Uncharacterized protein.	0.793
G3XLX0_ASPNA	G3Y204_ASPNA	G3XLX0	G3Y204	RNase III domain-containing protein.	ATP-dependent RNA helicase of the DEAD-box protein family; Belongs to the DEAD box helicase family.	0.881
G3XLX0_ASPNA	G3Y381_ASPNA	G3XLX0	G3Y381	RNase III domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.900
G3XLX0_ASPNA	G3Y3F7_ASPNA	G3XLX0	G3Y3F7	RNase III domain-containing protein.	Uncharacterized protein.	0.788
G3XLX0_ASPNA	G3Y6M4_ASPNA	G3XLX0	G3Y6M4	RNase III domain-containing protein.	Uncharacterized protein.	0.788
G3XLX0_ASPNA	G3Y8G4_ASPNA	G3XLX0	G3Y8G4	RNase III domain-containing protein.	Uncharacterized protein.	0.788
G3XLX0_ASPNA	G3YF92_ASPNA	G3XLX0	G3YF92	RNase III domain-containing protein.	Uncharacterized protein.	0.780
G3XLX0_ASPNA	G3YFI9_ASPNA	G3XLX0	G3YFI9	RNase III domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.777
G3XLX0_ASPNA	G3YH46_ASPNA	G3XLX0	G3YH46	RNase III domain-containing protein.	Uncharacterized protein.	0.785
G3XXI0_ASPNA	G3XLX0_ASPNA	G3XXI0	G3XLX0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	RNase III domain-containing protein.	0.812
G3XXI0_ASPNA	G3Y0I7_ASPNA	G3XXI0	G3Y0I7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.998
G3XXI0_ASPNA	G3YF92_ASPNA	G3XXI0	G3YF92	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.998
G3XXI0_ASPNA	G3YFI9_ASPNA	G3XXI0	G3YFI9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
G3XXI0_ASPNA	G3YH46_ASPNA	G3XXI0	G3YH46	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
G3Y0I7_ASPNA	G3XLX0_ASPNA	G3Y0I7	G3XLX0	Uncharacterized protein.	RNase III domain-containing protein.	0.793
G3Y0I7_ASPNA	G3XXI0_ASPNA	G3Y0I7	G3XXI0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.998
G3Y0I7_ASPNA	G3YF92_ASPNA	G3Y0I7	G3YF92	Uncharacterized protein.	Uncharacterized protein.	0.998
G3Y0I7_ASPNA	G3YFI9_ASPNA	G3Y0I7	G3YFI9	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.998
G3Y0I7_ASPNA	G3YH46_ASPNA	G3Y0I7	G3YH46	Uncharacterized protein.	Uncharacterized protein.	0.998