Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G3XRE1_ASPNA | G3XRJ6_ASPNA | G3XRE1 | G3XRJ6 | Protein kinase domain-containing protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.986 |
G3XRE1_ASPNA | G3XUS1_ASPNA | G3XRE1 | G3XUS1 | Protein kinase domain-containing protein. | Translation initiation factor 4E, mRNA-cap binding subunit; Belongs to the eukaryotic initiation factor 4E family. | 0.730 |
G3XRE1_ASPNA | G3Y1U2_ASPNA | G3XRE1 | G3Y1U2 | Protein kinase domain-containing protein. | Translation initiation factor eIF4A; Belongs to the DEAD box helicase family. | 0.695 |
G3XRE1_ASPNA | PAN2 | G3XRE1 | G3YCS0 | Protein kinase domain-containing protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.999 |
G3XRJ6_ASPNA | G3XRE1_ASPNA | G3XRJ6 | G3XRE1 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Protein kinase domain-containing protein. | 0.986 |
G3XRJ6_ASPNA | G3XU07_ASPNA | G3XRJ6 | G3XU07 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.940 |
G3XRJ6_ASPNA | G3XUS1_ASPNA | G3XRJ6 | G3XUS1 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Translation initiation factor 4E, mRNA-cap binding subunit; Belongs to the eukaryotic initiation factor 4E family. | 0.971 |
G3XRJ6_ASPNA | G3XVC8_ASPNA | G3XRJ6 | G3XVC8 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Nuclear cap-binding protein subunit 2. | 0.950 |
G3XRJ6_ASPNA | G3Y1U2_ASPNA | G3XRJ6 | G3Y1U2 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Translation initiation factor eIF4A; Belongs to the DEAD box helicase family. | 0.974 |
G3XRJ6_ASPNA | G3Y2M1_ASPNA | G3XRJ6 | G3Y2M1 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.940 |
G3XRJ6_ASPNA | G3YCU3_ASPNA | G3XRJ6 | G3YCU3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Tr-type G domain-containing protein. | 0.951 |
G3XRJ6_ASPNA | G3YFR3_ASPNA | G3XRJ6 | G3YFR3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | LsmAD domain-containing protein. | 0.968 |
G3XRJ6_ASPNA | G3YHG6_ASPNA | G3XRJ6 | G3YHG6 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Helicase ATP-binding domain-containing protein. | 0.966 |
G3XRJ6_ASPNA | PAN2 | G3XRJ6 | G3YCS0 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.980 |
G3XU07_ASPNA | G3XRJ6_ASPNA | G3XU07 | G3XRJ6 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.940 |
G3XU07_ASPNA | G3XUS1_ASPNA | G3XU07 | G3XUS1 | Uncharacterized protein. | Translation initiation factor 4E, mRNA-cap binding subunit; Belongs to the eukaryotic initiation factor 4E family. | 0.937 |
G3XU07_ASPNA | G3XVC8_ASPNA | G3XU07 | G3XVC8 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.849 |
G3XU07_ASPNA | G3Y1U2_ASPNA | G3XU07 | G3Y1U2 | Uncharacterized protein. | Translation initiation factor eIF4A; Belongs to the DEAD box helicase family. | 0.928 |
G3XU07_ASPNA | G3YCU3_ASPNA | G3XU07 | G3YCU3 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.564 |
G3XU07_ASPNA | G3YHG6_ASPNA | G3XU07 | G3YHG6 | Uncharacterized protein. | Helicase ATP-binding domain-containing protein. | 0.782 |
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