G3XS27_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3XS27_ASPNA

N-acetyltransferase domain-containing protein. (190 aa)

Predicted Functional Partners:

G3Y8K7_ASPNA

0.984

G3XWD5_ASPNA

0.518

G3Y5V5_ASPNA

0.515

G3Y8S8_ASPNA

0.515

G3XVL6_ASPNA

0.514

dphE

0.489

G3YDL6_ASPNA

0.461

G3YG24_ASPNA

0.416

G3XSX8_ASPNA

0.411

G3Y4C1_ASPNA

0.411

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XS27_ASPNA	G3XSX8_ASPNA	G3XS27	G3XSX8	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.411
G3XS27_ASPNA	G3XVL6_ASPNA	G3XS27	G3XVL6	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.514
G3XS27_ASPNA	G3XWD5_ASPNA	G3XS27	G3XWD5	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.518
G3XS27_ASPNA	G3Y4C1_ASPNA	G3XS27	G3Y4C1	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.411
G3XS27_ASPNA	G3Y5V5_ASPNA	G3XS27	G3Y5V5	N-acetyltransferase domain-containing protein.	N-acetyltransferase domain-containing protein.	0.515
G3XS27_ASPNA	G3Y8K7_ASPNA	G3XS27	G3Y8K7	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.984
G3XS27_ASPNA	G3Y8S8_ASPNA	G3XS27	G3Y8S8	N-acetyltransferase domain-containing protein.	N-acetyltransferase domain-containing protein.	0.515
G3XS27_ASPNA	G3YDL6_ASPNA	G3XS27	G3YDL6	N-acetyltransferase domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.461
G3XS27_ASPNA	G3YG24_ASPNA	G3XS27	G3YG24	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.416
G3XS27_ASPNA	dphE	G3XS27	G3YER2	N-acetyltransferase domain-containing protein.	TP_methylase domain-containing protein.	0.489
G3XSX8_ASPNA	G3XS27_ASPNA	G3XSX8	G3XS27	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.411
G3XSX8_ASPNA	G3XWD5_ASPNA	G3XSX8	G3XWD5	Uncharacterized protein.	Uncharacterized protein.	0.927
G3XSX8_ASPNA	G3Y8K7_ASPNA	G3XSX8	G3Y8K7	Uncharacterized protein.	Uncharacterized protein.	0.528
G3XVL6_ASPNA	G3XS27_ASPNA	G3XVL6	G3XS27	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.514
G3XVL6_ASPNA	G3XWD5_ASPNA	G3XVL6	G3XWD5	Uncharacterized protein.	Uncharacterized protein.	0.418
G3XVL6_ASPNA	G3Y5V5_ASPNA	G3XVL6	G3Y5V5	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.994
G3XVL6_ASPNA	G3Y8K7_ASPNA	G3XVL6	G3Y8K7	Uncharacterized protein.	Uncharacterized protein.	0.556
G3XVL6_ASPNA	G3Y8S8_ASPNA	G3XVL6	G3Y8S8	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.447
G3XWD5_ASPNA	G3XS27_ASPNA	G3XWD5	G3XS27	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.518
G3XWD5_ASPNA	G3XSX8_ASPNA	G3XWD5	G3XSX8	Uncharacterized protein.	Uncharacterized protein.	0.927