G3XVZ0_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3XVZ0_ASPNA

Uncharacterized protein. (402 aa)

Predicted Functional Partners:

G3Y0H0_ASPNA

0.622

G3XRG5_ASPNA

0.563

G3XTF7_ASPNA

0.561

G3Y930_ASPNA

0.553

G3YGH8_ASPNA

0.550

G3Y9T8_ASPNA

0.547

G3XUX3_ASPNA

0.545

G3XSV7_ASPNA

0.540

G3XXK4_ASPNA

0.540

G3XYY0_ASPNA

0.540

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XRG5_ASPNA	G3XTF7_ASPNA	G3XRG5	G3XTF7	WD_REPEATS_REGION domain-containing protein.	B30.2/SPRY domain-containing protein.	0.998
G3XRG5_ASPNA	G3XVZ0_ASPNA	G3XRG5	G3XVZ0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.563
G3XRG5_ASPNA	G3Y0H0_ASPNA	G3XRG5	G3Y0H0	WD_REPEATS_REGION domain-containing protein.	UBA domain-containing protein.	0.789
G3XSV7_ASPNA	G3XVZ0_ASPNA	G3XSV7	G3XVZ0	Uncharacterized protein.	Uncharacterized protein.	0.540
G3XSV7_ASPNA	G3XXK4_ASPNA	G3XSV7	G3XXK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.804
G3XSV7_ASPNA	G3XYY0_ASPNA	G3XSV7	G3XYY0	Uncharacterized protein.	Uncharacterized protein.	0.798
G3XTF7_ASPNA	G3XRG5_ASPNA	G3XTF7	G3XRG5	B30.2/SPRY domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
G3XTF7_ASPNA	G3XVZ0_ASPNA	G3XTF7	G3XVZ0	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.561
G3XTF7_ASPNA	G3Y0H0_ASPNA	G3XTF7	G3Y0H0	B30.2/SPRY domain-containing protein.	UBA domain-containing protein.	0.764
G3XUX3_ASPNA	G3XVZ0_ASPNA	G3XUX3	G3XVZ0	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.545
G3XUX3_ASPNA	G3Y9T8_ASPNA	G3XUX3	G3Y9T8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.999
G3XUX3_ASPNA	G3YGH8_ASPNA	G3XUX3	G3YGH8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
G3XVZ0_ASPNA	G3XRG5_ASPNA	G3XVZ0	G3XRG5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.563
G3XVZ0_ASPNA	G3XSV7_ASPNA	G3XVZ0	G3XSV7	Uncharacterized protein.	Uncharacterized protein.	0.540
G3XVZ0_ASPNA	G3XTF7_ASPNA	G3XVZ0	G3XTF7	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.561
G3XVZ0_ASPNA	G3XUX3_ASPNA	G3XVZ0	G3XUX3	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.545
G3XVZ0_ASPNA	G3XXK4_ASPNA	G3XVZ0	G3XXK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.540
G3XVZ0_ASPNA	G3XYY0_ASPNA	G3XVZ0	G3XYY0	Uncharacterized protein.	Uncharacterized protein.	0.540
G3XVZ0_ASPNA	G3Y0H0_ASPNA	G3XVZ0	G3Y0H0	Uncharacterized protein.	UBA domain-containing protein.	0.622
G3XVZ0_ASPNA	G3Y930_ASPNA	G3XVZ0	G3Y930	Uncharacterized protein.	Protein kinase domain-containing protein.	0.553