G3XYS8_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3XYS8_ASPNA

Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (354 aa)

Predicted Functional Partners:

G3XN82_ASPNA

0.999

G3XRN1_ASPNA

0.999

G3XRT4_ASPNA

0.999

G3XSZ8_ASPNA

0.999

G3XVK6_ASPNA

0.999

G3XZ76_ASPNA

0.999

G3Y2Q4_ASPNA

0.999

G3Y4T8_ASPNA

0.999

G3Y9V5_ASPNA

0.999

G3YB82_ASPNA

0.999

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XN82_ASPNA	G3XRN1_ASPNA	G3XN82	G3XRN1	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
G3XN82_ASPNA	G3XRT4_ASPNA	G3XN82	G3XRT4	Uncharacterized protein.	Ribosomal_L18A domain-containing protein.	0.999
G3XN82_ASPNA	G3XSZ8_ASPNA	G3XN82	G3XSZ8	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.992
G3XN82_ASPNA	G3XVK6_ASPNA	G3XN82	G3XVK6	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999
G3XN82_ASPNA	G3XYS8_ASPNA	G3XN82	G3XYS8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
G3XN82_ASPNA	G3XZ76_ASPNA	G3XN82	G3XZ76	Uncharacterized protein.	Uncharacterized protein.	0.999
G3XN82_ASPNA	G3Y2Q4_ASPNA	G3XN82	G3Y2Q4	Uncharacterized protein.	Uncharacterized protein.	0.999
G3XN82_ASPNA	G3Y4T8_ASPNA	G3XN82	G3Y4T8	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein.	0.999
G3XN82_ASPNA	G3Y9V5_ASPNA	G3XN82	G3Y9V5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
G3XN82_ASPNA	G3YB82_ASPNA	G3XN82	G3YB82	Uncharacterized protein.	KOW domain-containing protein.	0.999
G3XRN1_ASPNA	G3XN82_ASPNA	G3XRN1	G3XN82	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Uncharacterized protein.	0.999
G3XRN1_ASPNA	G3XRT4_ASPNA	G3XRN1	G3XRT4	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal_L18A domain-containing protein.	0.999
G3XRN1_ASPNA	G3XSZ8_ASPNA	G3XRN1	G3XSZ8	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal_L2_C domain-containing protein.	0.993
G3XRN1_ASPNA	G3XVK6_ASPNA	G3XRN1	G3XVK6	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal_L7Ae domain-containing protein.	0.999
G3XRN1_ASPNA	G3XYS8_ASPNA	G3XRN1	G3XYS8	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
G3XRN1_ASPNA	G3XZ76_ASPNA	G3XRN1	G3XZ76	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Uncharacterized protein.	0.999
G3XRN1_ASPNA	G3Y2Q4_ASPNA	G3XRN1	G3Y2Q4	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Uncharacterized protein.	0.999
G3XRN1_ASPNA	G3Y4T8_ASPNA	G3XRN1	G3Y4T8	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal_L23eN domain-containing protein.	0.999
G3XRN1_ASPNA	G3Y9V5_ASPNA	G3XRN1	G3Y9V5	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
G3XRN1_ASPNA	G3YB82_ASPNA	G3XRN1	G3YB82	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	KOW domain-containing protein.	0.999