STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3XZZ9_ASPNADihydrodipicolinate synthase; Belongs to the DapA family. (306 aa)    
Predicted Functional Partners:
G3YFP4_ASPNA
Aminotran_5 domain-containing protein.
   
 
 0.813
G3Y9K0_ASPNA
Aspartate aminotransferase.
   
 0.804
G3Y696_ASPNA
Aminotran_1_2 domain-containing protein.
   
  0.796
G3XRA7_ASPNA
DAO domain-containing protein.
   
 
  0.795
G3XXS3_ASPNA
Malate synthase; Belongs to the malate synthase family.
   
 
 0.791
G3XSW3_ASPNA
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.788
G3YAV6_ASPNA
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.788
G3XTJ8_ASPNA
Isocitrate lyase.
   
 
  0.786
G3XW67_ASPNA
Methylisocitrate lyase.
   
 
  0.786
G3YHM3_ASPNA
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.777
Your Current Organism:
Aspergillus niger
NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015
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