G3Y1W8_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3Y1W8_ASPNA

Uncharacterized protein. (446 aa)

Predicted Functional Partners:

G3XLN2_ASPNA

0.804

G3XWX7_ASPNA

0.804

G3XSN1_ASPNA

0.732

G3XQM4_ASPNA

0.682

G3XTF0_ASPNA

0.657

G3Y0V6_ASPNA

0.655

G3XTM8_ASPNA

0.653

G3Y915_ASPNA

0.639

G3Y3G8_ASPNA

0.637

G3YGR4_ASPNA

0.618

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLN2_ASPNA	G3XSN1_ASPNA	G3XLN2	G3XSN1	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Brix domain-containing protein.	0.403
G3XLN2_ASPNA	G3XWX7_ASPNA	G3XLN2	G3XWX7	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.996
G3XLN2_ASPNA	G3Y1W8_ASPNA	G3XLN2	G3Y1W8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.804
G3XLN2_ASPNA	G3Y915_ASPNA	G3XLN2	G3Y915	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.534
G3XQM4_ASPNA	G3XSN1_ASPNA	G3XQM4	G3XSN1	Uncharacterized protein.	Brix domain-containing protein.	0.532
G3XQM4_ASPNA	G3XTF0_ASPNA	G3XQM4	G3XTF0	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.	0.606
G3XQM4_ASPNA	G3XTM8_ASPNA	G3XQM4	G3XTM8	Uncharacterized protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.632
G3XQM4_ASPNA	G3XWX7_ASPNA	G3XQM4	G3XWX7	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.520
G3XQM4_ASPNA	G3Y0V6_ASPNA	G3XQM4	G3Y0V6	Uncharacterized protein.	PseudoU_synth_1 domain-containing protein.	0.624
G3XQM4_ASPNA	G3Y1W8_ASPNA	G3XQM4	G3Y1W8	Uncharacterized protein.	Uncharacterized protein.	0.682
G3XQM4_ASPNA	G3Y3G8_ASPNA	G3XQM4	G3Y3G8	Uncharacterized protein.	THUMP domain-containing protein.	0.433
G3XQM4_ASPNA	G3Y915_ASPNA	G3XQM4	G3Y915	Uncharacterized protein.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.698
G3XQM4_ASPNA	G3YGR4_ASPNA	G3XQM4	G3YGR4	Uncharacterized protein.	Sas10/Utp3 protein.	0.751
G3XSN1_ASPNA	G3XLN2_ASPNA	G3XSN1	G3XLN2	Brix domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.403
G3XSN1_ASPNA	G3XQM4_ASPNA	G3XSN1	G3XQM4	Brix domain-containing protein.	Uncharacterized protein.	0.532
G3XSN1_ASPNA	G3XTF0_ASPNA	G3XSN1	G3XTF0	Brix domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.	0.735
G3XSN1_ASPNA	G3XTM8_ASPNA	G3XSN1	G3XTM8	Brix domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.880
G3XSN1_ASPNA	G3Y0V6_ASPNA	G3XSN1	G3Y0V6	Brix domain-containing protein.	PseudoU_synth_1 domain-containing protein.	0.656
G3XSN1_ASPNA	G3Y1W8_ASPNA	G3XSN1	G3Y1W8	Brix domain-containing protein.	Uncharacterized protein.	0.732
G3XSN1_ASPNA	G3Y915_ASPNA	G3XSN1	G3Y915	Brix domain-containing protein.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.951