STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Y5Y3_ASPNAUncharacterized protein. (523 aa)    
Predicted Functional Partners:
G3Y1P2_ASPNA
Bms1-type G domain-containing protein.
   
  0.562
h4-2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.558
G3Y0V3_ASPNA
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.551
G3YFN2_ASPNA
Uncharacterized protein.
   
  0.549
G3XN13_ASPNA
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
  0.548
G3XRK8_ASPNA
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.539
G3Y3D9_ASPNA
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.539
G3Y9G2_ASPNA
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.539
G3YBH9_ASPNA
40S ribosomal protein S27.
    
  0.539
G3YDW3_ASPNA
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.539
Your Current Organism:
Aspergillus niger
NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.