G3Y637_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3Y637_ASPNA

SH3 domain-containing protein. (1212 aa)

Predicted Functional Partners:

G3YFJ9_ASPNA

0.898

G3Y052_ASPNA

0.873

G3YGH8_ASPNA

0.871

G3XUX3_ASPNA

0.868

G3YCV0_ASPNA

0.864

G3XN59_ASPNA

0.854

G3YGI0_ASPNA

0.853

G3XZJ5_ASPNA

0.849

G3XYW8_ASPNA

0.846

G3Y9T8_ASPNA

0.845

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XN59_ASPNA	G3XUX3_ASPNA	G3XN59	G3XUX3	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.996
G3XN59_ASPNA	G3XYW8_ASPNA	G3XN59	G3XYW8	Uncharacterized protein.	Uncharacterized protein.	0.604
G3XN59_ASPNA	G3Y052_ASPNA	G3XN59	G3Y052	Uncharacterized protein.	Uncharacterized protein.	0.998
G3XN59_ASPNA	G3Y637_ASPNA	G3XN59	G3Y637	Uncharacterized protein.	SH3 domain-containing protein.	0.854
G3XN59_ASPNA	G3Y9T8_ASPNA	G3XN59	G3Y9T8	Uncharacterized protein.	Uncharacterized protein.	0.992
G3XN59_ASPNA	G3YCV0_ASPNA	G3XN59	G3YCV0	Uncharacterized protein.	Uncharacterized protein.	0.990
G3XN59_ASPNA	G3YFJ9_ASPNA	G3XN59	G3YFJ9	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.750
G3XN59_ASPNA	G3YGH8_ASPNA	G3XN59	G3YGH8	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.994
G3XN59_ASPNA	G3YGI0_ASPNA	G3XN59	G3YGI0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.804
G3XUX3_ASPNA	G3XN59_ASPNA	G3XUX3	G3XN59	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.996
G3XUX3_ASPNA	G3XYW8_ASPNA	G3XUX3	G3XYW8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.609
G3XUX3_ASPNA	G3Y052_ASPNA	G3XUX3	G3Y052	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.996
G3XUX3_ASPNA	G3Y637_ASPNA	G3XUX3	G3Y637	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	SH3 domain-containing protein.	0.868
G3XUX3_ASPNA	G3Y9T8_ASPNA	G3XUX3	G3Y9T8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.999
G3XUX3_ASPNA	G3YCV0_ASPNA	G3XUX3	G3YCV0	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.992
G3XUX3_ASPNA	G3YFJ9_ASPNA	G3XUX3	G3YFJ9	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.788
G3XUX3_ASPNA	G3YGH8_ASPNA	G3XUX3	G3YGH8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
G3XUX3_ASPNA	G3YGI0_ASPNA	G3XUX3	G3YGI0	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Ubiquitin-like domain-containing protein.	0.675
G3XYW8_ASPNA	G3XN59_ASPNA	G3XYW8	G3XN59	Uncharacterized protein.	Uncharacterized protein.	0.604
G3XYW8_ASPNA	G3XUX3_ASPNA	G3XYW8	G3XUX3	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.609