STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3YCG1_ASPNACalpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (781 aa)    
Predicted Functional Partners:
G3Y231_ASPNA
Uncharacterized protein.
   
 0.936
pacC
PacC wide domain regulatory protein, pH response.
   
 0.708
G3Y695_ASPNA
TPR_REGION domain-containing protein.
    
   0.618
G3YEC4_ASPNA
Uncharacterized protein.
    
 
 0.601
G3XLU3_ASPNA
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.555
G3Y4U6_ASPNA
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
   0.555
G3YDW9_ASPNA
Myotubularin phosphatase domain-containing protein.
    
   0.555
G3YEJ5_ASPNA
Uncharacterized protein.
    
   0.555
G3Y2E6_ASPNA
Uncharacterized protein.
    
 
 0.533
G3XRW0_ASPNA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.530
Your Current Organism:
Aspergillus niger
NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015
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