G3YGR6_ASPNA protein (Aspergillus niger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3YGR6_ASPNA

Uncharacterized protein; Belongs to the ClpA/ClpB family. (798 aa)

Predicted Functional Partners:

G3Y1W2_ASPNA

0.974

G3XRQ5_ASPNA

0.953

G3Y1Q7_ASPNA

0.928

G3Y828_ASPNA

0.876

G3Y4H0_ASPNA

0.875

G3XUW4_ASPNA

0.852

G3YBM1_ASPNA

0.849

G3YHB8_ASPNA

0.820

G3XLT7_ASPNA

0.816

G3XT65_ASPNA

0.816

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLT7_ASPNA	G3XRQ5_ASPNA	G3XLT7	G3XRQ5	HATPase_c domain-containing protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.844
G3XLT7_ASPNA	G3XUW4_ASPNA	G3XLT7	G3XUW4	HATPase_c domain-containing protein.	Uncharacterized protein.	0.991
G3XLT7_ASPNA	G3Y1Q7_ASPNA	G3XLT7	G3Y1Q7	HATPase_c domain-containing protein.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.860
G3XLT7_ASPNA	G3Y1W2_ASPNA	G3XLT7	G3Y1W2	HATPase_c domain-containing protein.	ATP-dependent Clp protease proteolytic subunit.	0.606
G3XLT7_ASPNA	G3Y4H0_ASPNA	G3XLT7	G3Y4H0	HATPase_c domain-containing protein.	J domain-containing protein.	0.926
G3XLT7_ASPNA	G3Y828_ASPNA	G3XLT7	G3Y828	HATPase_c domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.592
G3XLT7_ASPNA	G3YBM1_ASPNA	G3XLT7	G3YBM1	HATPase_c domain-containing protein.	Uncharacterized protein; Belongs to the GroES chaperonin family.	0.884
G3XLT7_ASPNA	G3YGR6_ASPNA	G3XLT7	G3YGR6	HATPase_c domain-containing protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.816
G3XLT7_ASPNA	G3YHB8_ASPNA	G3XLT7	G3YHB8	HATPase_c domain-containing protein.	Uncharacterized protein.	0.925
G3XRQ5_ASPNA	G3XLT7_ASPNA	G3XRQ5	G3XLT7	Uncharacterized protein; Belongs to the ClpA/ClpB family.	HATPase_c domain-containing protein.	0.844
G3XRQ5_ASPNA	G3XT65_ASPNA	G3XRQ5	G3XT65	Uncharacterized protein; Belongs to the ClpA/ClpB family.	Flavin_Reduct domain-containing protein.	0.844
G3XRQ5_ASPNA	G3XUW4_ASPNA	G3XRQ5	G3XUW4	Uncharacterized protein; Belongs to the ClpA/ClpB family.	Uncharacterized protein.	0.912
G3XRQ5_ASPNA	G3Y1Q7_ASPNA	G3XRQ5	G3Y1Q7	Uncharacterized protein; Belongs to the ClpA/ClpB family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.928
G3XRQ5_ASPNA	G3Y1W2_ASPNA	G3XRQ5	G3Y1W2	Uncharacterized protein; Belongs to the ClpA/ClpB family.	ATP-dependent Clp protease proteolytic subunit.	0.974
G3XRQ5_ASPNA	G3Y4H0_ASPNA	G3XRQ5	G3Y4H0	Uncharacterized protein; Belongs to the ClpA/ClpB family.	J domain-containing protein.	0.923
G3XRQ5_ASPNA	G3Y828_ASPNA	G3XRQ5	G3Y828	Uncharacterized protein; Belongs to the ClpA/ClpB family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.917
G3XRQ5_ASPNA	G3YBM1_ASPNA	G3XRQ5	G3YBM1	Uncharacterized protein; Belongs to the ClpA/ClpB family.	Uncharacterized protein; Belongs to the GroES chaperonin family.	0.849
G3XRQ5_ASPNA	G3YGR6_ASPNA	G3XRQ5	G3YGR6	Uncharacterized protein; Belongs to the ClpA/ClpB family.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.953
G3XRQ5_ASPNA	G3YHB8_ASPNA	G3XRQ5	G3YHB8	Uncharacterized protein; Belongs to the ClpA/ClpB family.	Uncharacterized protein.	0.820
G3XT65_ASPNA	G3XRQ5_ASPNA	G3XT65	G3XRQ5	Flavin_Reduct domain-containing protein.	Uncharacterized protein; Belongs to the ClpA/ClpB family.	0.844