STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACG56827.1PFAM: polysaccharide deacetylase; KEGG: cbf:CLI_2851 polysaccharide deacetylase family protein. (250 aa)    
Predicted Functional Partners:
ACG58259.1
PFAM: glycosyl transferase family 2; KEGG: apa:APP7_1479 glycosyl transferase, group 2 family protein.
  
  
 0.724
ACG56825.1
TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin binding domain; molybdopterin cofactor biosynthesis MoaC region; KEGG: sul:SYO3AOP1_1766 molybdenum cofactor biosynthesis protein C.
       0.675
ACG56826.1
Purine phosphorylase family 2; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
       0.668
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.606
ACG56828.1
KEGG: sul:SYO3AOP1_0421 hypothetical protein.
       0.581
ddl
D-alanine/D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.581
ACG56824.1
PFAM: nitrogen regulatory protein P-II; KEGG: aae:aq_109 nitrogen regulatory PII protein; Belongs to the P(II) protein family.
  
    0.434
ACG56832.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
  
    0.429
ACG56831.1
KEGG: nis:NIS_0136 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
       0.428
ACG56823.1
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aae:aq_111 glutamine synthetase.
     
 0.406
Your Current Organism:
Hydrogenobaculum sp. Y04AAS1
NCBI taxonomy Id: 380749
Other names: H. sp. Y04AAS1
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