STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACG57166.1KEGG: gur:Gura_3306 hypothetical protein. (129 aa)    
Predicted Functional Partners:
ACG57164.1
PFAM: protein of unknown function DUF752; KEGG: aae:aq_1980 hypothetical protein.
       0.773
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.773
ACG57167.1
PFAM: beta-lactamase domain protein; KEGG: aae:aq_2135 hypothetical protein.
       0.773
ACG57168.1
Hypothetical protein.
       0.773
ACG57169.1
PFAM: protein of unknown function DUF58; KEGG: aae:aq_1508 hypothetical protein.
       0.678
ACG57170.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aae:aq_1509 putative oligopeptide transport system permease protein.
       0.678
ACG57171.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mja:MJ1656 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HpcE).
       0.678
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.620
argG
PFAM: argininosuccinate synthase; ExsB family protein; KEGG: aae:aq_1140 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.620
Your Current Organism:
Hydrogenobaculum sp. Y04AAS1
NCBI taxonomy Id: 380749
Other names: H. sp. Y04AAS1
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