STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACG57391.1PFAM: protein of unknown function DUF86; KEGG: gur:Gura_4166 protein of unknown function DUF86. (95 aa)    
Predicted Functional Partners:
ACG57390.1
PFAM: DNA polymerase beta domain protein region; KEGG: glo:Glov_3039 DNA polymerase beta domain protein region.
 
  
 0.956
ACG57389.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sul:SYO3AOP1_0734 TonB-dependent receptor.
       0.524
ACG57392.1
PFAM: TonB-dependent receptor; KEGG: acr:Acry_0295 TonB-dependent receptor.
       0.504
Your Current Organism:
Hydrogenobaculum sp. Y04AAS1
NCBI taxonomy Id: 380749
Other names: H. sp. Y04AAS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.