STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACG57477.1PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_1614 outer membrane efflux protein. (423 aa)    
Predicted Functional Partners:
ACG57478.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sul:SYO3AOP1_1613 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.954
ACG57479.1
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_1612 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.939
ACG56700.1
PFAM: secretion protein HlyD family protein; KEGG: sul:SYO3AOP1_0311 secretion protein HlyD family protein.
 
 
 0.716
ACG58074.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aae:aq_698 acriflavin resistance protein AcrE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.640
ACG57260.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sul:SYO3AOP1_1133 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.630
ACG57537.1
PFAM: secretion protein HlyD family protein; KEGG: sul:SYO3AOP1_1379 secretion protein HlyD family protein.
 
 
 0.614
ACG57469.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: aae:aq_1331 cation efflux system (CzcB-like); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.588
ACG57476.1
Hypothetical protein.
       0.543
ACG57470.1
PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_0349 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.525
ACG57481.1
PFAM: Carbohydrate-selective porin OprB; KEGG: sus:Acid_2724 carbohydrate-selective porin OprB; Belongs to the OprB family.
  
   
 0.503
Your Current Organism:
Hydrogenobaculum sp. Y04AAS1
NCBI taxonomy Id: 380749
Other names: H. sp. Y04AAS1
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