STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACG58085.1PFAM: nickel-dependent hydrogenase large subunit; KEGG: aae:aq_804 hydrogenase large chain. (439 aa)    
Predicted Functional Partners:
ACG58084.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: aae:aq_802 hydrogenase small chain.
 0.999
ACG58111.1
KEGG: aae:aq_660 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein.
 
 0.996
ACG56746.1
KEGG: aae:aq_660 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein.
 0.995
ACG56744.1
TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: aae:aq_665 Ni/Fe hydrogenase B-type cytochrome subunit.
 
 
 0.965
ACG56745.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: aae:aq_662 hydrogenase large chain; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
  
 
0.922
ACG58083.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: aae:aq_321 hypothetical protein.
 
     0.869
ACG56741.1
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: aae:aq_1157 hydrogenase expression/formation protein HypD.
 
 
 0.821
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
 
 0.809
ACG57766.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_395 heterodisulfide reductase subunit A.
  
 
 0.803
ACG56738.1
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: aae:aq_672 transcriptional regulatory protein HypF.
 
 
 
 0.755
Your Current Organism:
Hydrogenobaculum sp. Y04AAS1
NCBI taxonomy Id: 380749
Other names: H. sp. Y04AAS1
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