STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACG58124.1KEGG: bid:Bind_2816 hypothetical protein. (187 aa)    
Predicted Functional Partners:
ACG58122.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sul:SYO3AOP1_0617 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit.
       0.773
ACG58123.1
PFAM: pentapeptide repeat protein; KEGG: sul:SYO3AOP1_0707 pentapeptide repeat protein.
       0.773
ACG58121.1
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: sul:SYO3AOP1_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
       0.757
ACG58125.1
PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; KEGG: aae:aq_1422 hypothetical DNA polymerase / putative histidinol phosphatase.
       0.693
ACG58126.1
Polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: aae:aq_411 tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.693
ACG57392.1
PFAM: TonB-dependent receptor; KEGG: acr:Acry_0295 TonB-dependent receptor.
  
     0.584
ACG57396.1
PFAM: phosphoesterase; KEGG: sus:Acid_4558 40-residue YVTN family beta-propeller repeat protein.
  
     0.584
ACG57284.1
KEGG: afu:AF0555 hypothetical protein.
  
     0.576
ACG58118.1
PFAM: OsmC family protein; KEGG: aae:aq_1515 hypothetical protein.
 
     0.528
ACG58120.1
Oxaloacetate decarboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: aae:aq_1520 pyruvate carboxylase subunit B.
       0.480
Your Current Organism:
Hydrogenobaculum sp. Y04AAS1
NCBI taxonomy Id: 380749
Other names: H. sp. Y04AAS1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.