STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBQ74700.1Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)    
Predicted Functional Partners:
OBQ74701.1
Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.967
OBQ59983.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.747
OBQ74342.1
Nitrate transport permease nrtB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.648
OBQ74310.1
Nitrate transport permease nrtB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.636
OBQ73624.1
Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.633
OBQ61394.1
Nitrate transport permease nrtB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.624
OBQ60223.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.622
OBQ74884.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.606
OBQ74595.1
Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
  0.593
OBQ63763.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.582
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
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