Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBQ62692.1 | OBQ74905.1 | A8146_16405 | A8146_04015 | Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.614 |
OBQ74903.1 | OBQ74904.1 | A8146_04005 | A8146_04010 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
OBQ74903.1 | OBQ74905.1 | A8146_04005 | A8146_04015 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
OBQ74904.1 | OBQ74903.1 | A8146_04010 | A8146_04005 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
OBQ74904.1 | OBQ74905.1 | A8146_04010 | A8146_04015 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
OBQ74905.1 | OBQ62692.1 | A8146_04015 | A8146_16405 | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.614 |
OBQ74905.1 | OBQ74903.1 | A8146_04015 | A8146_04005 | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
OBQ74905.1 | OBQ74904.1 | A8146_04015 | A8146_04010 | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
OBQ74905.1 | OBQ74906.1 | A8146_04015 | A8146_04025 | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OBQ74905.1 | OBQ75456.1 | A8146_04015 | A8146_04020 | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.449 |
OBQ74905.1 | gcvP | A8146_04015 | A8146_05020 | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.462 |
OBQ74906.1 | OBQ74905.1 | A8146_04025 | A8146_04015 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OBQ74906.1 | OBQ75456.1 | A8146_04025 | A8146_04020 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.830 |
OBQ75456.1 | OBQ74905.1 | A8146_04020 | A8146_04015 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OBQ75456.1 | OBQ74906.1 | A8146_04020 | A8146_04025 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
gcvP | OBQ74905.1 | A8146_05020 | A8146_04015 | Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |