STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBQ68158.1Methylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)    
Predicted Functional Partners:
OBQ67269.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OBQ67635.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
OBQ74213.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
OBQ67721.1
Cytosine deaminase; Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
OBQ67227.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.827
OBQ67637.1
Acetone carboxylase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.803
OBQ74214.1
Hydantoin utilization protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.726
OBQ74656.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.592
OBQ67270.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
       0.498
OBQ67268.1
ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
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