STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBQ63353.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (4067 aa)    
Predicted Functional Partners:
OBQ63354.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.740
OBQ63356.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.721
OBQ63355.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.715
OBQ63696.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.707
OBQ63695.1
Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.563
OBQ75364.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.517
OBQ63705.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.517
OBQ69751.1
G-D-S-L family lipolytic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.517
OBQ61220.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
OBQ58532.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
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