STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBQ63665.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
OBQ62566.1
Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.998
OBQ71192.1
Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.998
OBQ62564.1
Cytochrome c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OBQ71193.1
Cytochrome c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OBQ70121.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.811
OBQ62730.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.773
OBQ60168.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.773
OBQ70120.1
Ribosomal protein P2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.748
OBQ67821.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.697
OBQ70151.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.697
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
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