STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBQ59356.1Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)    
Predicted Functional Partners:
OBQ57985.1
Magnesium-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.696
OBQ67219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.614
OBQ73314.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.578
OBQ60246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.535
OBQ71059.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.534
OBQ59357.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
OBQ59358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.524
OBQ75140.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.480
OBQ67900.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.478
OBQ73580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.467
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
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