STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBQ69873.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)    
Predicted Functional Partners:
OBQ69874.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.953
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.897
OBQ68023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.874
OBQ68256.1
Type I secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.858
OBQ68017.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.815
OBQ68257.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.813
OBQ62602.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.786
OBQ69872.1
1,3-1,4-beta-glycanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.775
OBQ74205.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.769
OBQ68102.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.751
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 381
Other names: ATCC 700743, CCUG 27878, DSM 2626, IFO 14779, JCM 21464, LMG 6125, LMG:6125, M. loti, Mesorhizobium sp. LMG 6125, NBRC 14779, NZP 2213, Rhizobium loti
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