STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5DCJ7_LACTCTyrosine--tRNA ligase. (405 aa)    
Predicted Functional Partners:
C5DJA1_LACTC
KLTH0F14762p.
   
 
 0.956
C5E2K6_LACTC
KLTH0H05742p.
 
 
 0.952
C5DIL0_LACTC
Tyrosine--tRNA ligase.
    
 0.944
C5DIY2_LACTC
KLTH0E16082p.
      0.856
C5DLB7_LACTC
KLTH0F11660p.
  
  
 0.796
C5DLC9_LACTC
KLTH0F11946p; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.765
C5DF14_LACTC
KLTH0D11440p.
  
 
 0.761
C5DKB1_LACTC
KLTH0F03168p.
   
 
 0.756
C5DE61_LACTC
KLTH0C06534p; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.755
C5DHV1_LACTC
Tryptophan synthase.
  
  
 0.743
Your Current Organism:
Lachancea thermotolerans
NCBI taxonomy Id: 559295
Other names: Kluyveromyces thermotolerans CBS 6340, L. thermotolerans CBS 6340, Lachancea thermotolerans CBS 6340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.