STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY38792.1Assimilatory nitrate reductase (NADH) beta subunit. (576 aa)    
Predicted Functional Partners:
SDY38816.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.998
SDY38840.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.985
SDZ56447.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 0.956
SDZ05268.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 0.956
SDY38861.1
Nitrite reductase [NAD(P)H], small subunit.
 
  
 0.943
SDY38883.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 
0.913
SDY38930.1
uroporphyrinogen-III synthase.
 
  
 0.885
SDY38906.1
uroporphyrin-III C-methyltransferase.
 
  
 0.763
SDZ42085.1
Ferredoxin-NADP reductase.
  
 
 0.761
SDZ48131.1
Ferredoxin; Manually curated.
    
 0.714
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.