STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtlDD-mannitol 1-phosphate 5-dehydrogenase. (385 aa)    
Predicted Functional Partners:
SDY44977.1
PTS system D-mannitol-specific IIA component, Fru family.
 
 0.998
SDY45010.1
PTS system, mannitol-specific IIC component.
 
 
 0.994
SDY45147.1
Transcriptional antiterminator, BglG family.
 
 
 0.971
SDY66205.1
Glucuronate isomerase.
  
 
 0.840
SDZ16869.1
Fructose-1-phosphate kinase.
  
 
 0.798
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
    
 0.786
SDY66177.1
D-mannonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.777
SDZ41589.1
Mannose-6-phosphate isomerase, type 1.
     
 0.772
SDZ35902.1
Fructose-1,6-bisphosphatase II.
     
 0.769
SDZ17081.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
    
  0.768
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.