STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY47362.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (289 aa)    
Predicted Functional Partners:
SDY47330.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.974
SDY47394.1
Multiple sugar transport system substrate-binding protein.
 
  0.916
SDZ30795.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.916
SDY65003.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.911
SDY42400.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.903
SDY76347.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.898
SDY79423.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.898
SDY63937.1
Multiple sugar transport system permease protein.
 0.897
SDY83153.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.895
SDZ26176.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.895
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.