STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY99176.1Ig-like domain (group 3). (910 aa)    
Predicted Functional Partners:
SDZ25670.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
 0.795
SDY39459.1
Hypothetical protein; Partial gene; manually curated.
   
 0.715
SDY39495.1
Purple acid Phosphatase, N-terminal domain.
   
 0.715
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.683
SDY54274.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 0.627
SDY81498.1
5'-nucleotidase.
    
 0.623
SDZ44169.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.615
SDZ35132.1
Type VII secretion-associated serine protease mycosin.
    
  0.599
SDY76435.1
Hypothetical protein.
    
   0.507
SDZ27586.1
Hypothetical protein.
    
   0.507
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.