STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ03245.1Thiosulfate/3-mercaptopyruvate sulfurtransferase. (300 aa)    
Predicted Functional Partners:
SDZ03228.1
Cysteine desulfuration protein SufE.
     0.944
SDZ27600.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
  
  
0.921
SDZ50636.1
Cystathionine gamma-lyase.
 
 
 0.913
SDY61295.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.912
SDY76695.1
Cysteine desulfurase.
    
 0.907
SDZ28915.1
Cysteine desulfurase.
    
 0.907
SDZ50630.1
Cystathionine beta-synthase.
  
 
 0.858
SDZ52134.1
Succinyldiaminopimelate aminotransferase apoenzyme.
     
 0.840
SDY77089.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
 
  
 0.836
SDZ34838.1
Adenylyltransferase and sulfurtransferase.
   
 0.836
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.