STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ25311.1ADP-ribosylglycohydrolase. (389 aa)    
Predicted Functional Partners:
SDZ25329.1
ADP-ribosylglycohydrolase.
 
     0.957
SDZ25349.1
Sulfatase-modifying factor enzyme 1.
 
     0.954
SDZ25365.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
     0.923
SDZ25388.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
     0.914
SDZ25292.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.883
SDZ25248.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.860
SDZ25271.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.825
SDY48363.1
ADP-ribosylglycohydrolase.
  
     0.774
SDY48398.1
ADP-ribosylglycohydrolase.
  
     0.774
SDZ25407.1
Enterochelin esterase.
 
     0.758
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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