Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ08800.1 | SDZ28503.1 | SAMN05216554_2332 | SAMN05216554_3035 | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Peptidase family M23. | 0.765 |
SDZ28503.1 | SDZ08800.1 | SAMN05216554_3035 | SAMN05216554_2332 | Peptidase family M23. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.765 |
SDZ28503.1 | SDZ28520.1 | SAMN05216554_3035 | SAMN05216554_3036 | Peptidase family M23. | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.522 |
SDZ28503.1 | rpsB | SAMN05216554_3035 | SAMN05216554_3037 | Peptidase family M23. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.457 |
SDZ28503.1 | tsf | SAMN05216554_3035 | SAMN05216554_3038 | Peptidase family M23. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.402 |
SDZ28520.1 | SDZ28503.1 | SAMN05216554_3036 | SAMN05216554_3035 | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Peptidase family M23. | 0.522 |
SDZ28520.1 | rpsB | SAMN05216554_3036 | SAMN05216554_3037 | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.449 |
rpsB | SDZ28503.1 | SAMN05216554_3037 | SAMN05216554_3035 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | Peptidase family M23. | 0.457 |
rpsB | SDZ28520.1 | SAMN05216554_3037 | SAMN05216554_3036 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.449 |
rpsB | tsf | SAMN05216554_3037 | SAMN05216554_3038 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.999 |
tsf | SDZ28503.1 | SAMN05216554_3038 | SAMN05216554_3035 | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | Peptidase family M23. | 0.402 |
tsf | rpsB | SAMN05216554_3038 | SAMN05216554_3037 | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |