STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ30209.1ANTAR domain-containing protein. (223 aa)    
Predicted Functional Partners:
SDZ30229.1
ANTAR domain-containing protein.
    
0.777
SDY44109.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
   0.761
SDY44140.1
Substrate-binding protein.
  
   0.761
SDY51761.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
   0.761
SDZ48990.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
   0.761
SDZ49049.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
   0.761
SDZ53932.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
   0.761
SDZ51158.1
Protein of unknown function.
  
     0.468
SDZ30191.1
Fatty acid desaturase.
       0.461
SDZ04509.1
Glutamate synthase (NADH) large subunit.
  
  
 0.457
Your Current Organism:
Herbiconiux ginsengi
NCBI taxonomy Id: 381665
Other names: CGMCC 4.3491, DSM 19088, H. ginsengi, Herbiconiux ginsengi (Qiu et al. 2007) Behrendt et al. 2011, JCM 13908, Leifsonia ginsengi, Leifsonia ginsengi Qiu et al. 2007, Leifsonia sp. wged11, NBRC 104580, strain wged11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.