Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ07952.1 | SDZ11295.1 | SAMN05216554_2292 | SAMN05216554_2457 | Amidase; Belongs to the amidase family. | Acylphosphatase. | 0.894 |
SDZ07952.1 | SDZ26326.1 | SAMN05216554_2292 | SAMN05216554_2892 | Amidase; Belongs to the amidase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.870 |
SDZ07952.1 | SDZ42161.1 | SAMN05216554_2292 | SAMN05216554_3761 | Amidase; Belongs to the amidase family. | Amidase; Belongs to the amidase family. | 0.893 |
SDZ07952.1 | SDZ42377.1 | SAMN05216554_2292 | SAMN05216554_3777 | Amidase; Belongs to the amidase family. | Urea carboxylase. | 0.902 |
SDZ07952.1 | SDZ43686.1 | SAMN05216554_2292 | SAMN05216554_3871 | Amidase; Belongs to the amidase family. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.899 |
SDZ07952.1 | SDZ52199.1 | SAMN05216554_2292 | SAMN05216554_4378 | Amidase; Belongs to the amidase family. | Putative adenylate-forming enzyme. | 0.861 |
SDZ07952.1 | aspS | SAMN05216554_2292 | SAMN05216554_0825 | Amidase; Belongs to the amidase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily. | 0.878 |
SDZ07952.1 | gatA | SAMN05216554_2292 | SAMN05216554_3067 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.644 |
SDZ07952.1 | gatB | SAMN05216554_2292 | SAMN05216554_3068 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.988 |
SDZ07952.1 | gatC | SAMN05216554_2292 | SAMN05216554_3066 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.963 |
SDZ11295.1 | SDZ07952.1 | SAMN05216554_2457 | SAMN05216554_2292 | Acylphosphatase. | Amidase; Belongs to the amidase family. | 0.894 |
SDZ11295.1 | SDZ42161.1 | SAMN05216554_2457 | SAMN05216554_3761 | Acylphosphatase. | Amidase; Belongs to the amidase family. | 0.861 |
SDZ11295.1 | SDZ43686.1 | SAMN05216554_2457 | SAMN05216554_3871 | Acylphosphatase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.883 |
SDZ11295.1 | gatA | SAMN05216554_2457 | SAMN05216554_3067 | Acylphosphatase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.787 |
SDZ26326.1 | SDZ07952.1 | SAMN05216554_2892 | SAMN05216554_2292 | 4-hydroxyphenylpyruvate dioxygenase. | Amidase; Belongs to the amidase family. | 0.870 |
SDZ26326.1 | SDZ42161.1 | SAMN05216554_2892 | SAMN05216554_3761 | 4-hydroxyphenylpyruvate dioxygenase. | Amidase; Belongs to the amidase family. | 0.869 |
SDZ26326.1 | SDZ42377.1 | SAMN05216554_2892 | SAMN05216554_3777 | 4-hydroxyphenylpyruvate dioxygenase. | Urea carboxylase. | 0.561 |
SDZ26326.1 | SDZ43686.1 | SAMN05216554_2892 | SAMN05216554_3871 | 4-hydroxyphenylpyruvate dioxygenase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.870 |
SDZ26326.1 | gatA | SAMN05216554_2892 | SAMN05216554_3067 | 4-hydroxyphenylpyruvate dioxygenase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.800 |
SDZ42161.1 | SDZ07952.1 | SAMN05216554_3761 | SAMN05216554_2292 | Amidase; Belongs to the amidase family. | Amidase; Belongs to the amidase family. | 0.893 |
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